| Aat I | AGGCCT | Aat II | GACGTC |
| Acc I | GT(A/C)(G/T)AC | Acc II | CGCG |
| Acc III | TCCGGA | Afl III | AC(A/G)(C/T)GT |
| Age I | ACCGGT | Aha II | G(A/G)CG(C/T)C |
| Alu I | AGCT | Alw I | GGATC |
| Aos II | G(A/G)CG(C/T)C | Apa I | GGGCCC |
| ApaL I | GTGCAC | Apy I | CC(A/T)GG |
| Ase I | ATTAAT | Asp700 I | GAANNNNTTC |
| Asp7l8 I | GGTACC | Asu II | TTCGAA |
| Ava I | C(C/T)CG(A/G)G | Ava II | GG(A/T)CC |
| Avi II | AGCGCT | Bal I | TGGCCA |
| BamH I | GGATCC | Ban I | GG(C/T)(A/G)CC |
| Ban II | G(A/G)GC(C/T)C | Ban III | ATCGAT |
| Bbi II | G(A/G)CG(C/T)C | BbrP I | CACGTG |
| Bbs I | GAAGAC | Bbu I | GCATGC |
| Bbv I | GC(A/T)GC | Bcl I | TGATCA |
| Bcn I | CC(G/C)GG | Bfr I | CTTAAG |
| Bgl II | AGATCT | Bna I | GGATCC |
| Bsa I | GGTCTC | BsaA I | (C/T)ACGT(A/G) |
| BsaB I | GATNNNNATC | Bsm I | GAATGC |
| BsmA I | GTCTC | Bsp106 I | ATCGAT |
| Bgl I | GCCNNNNNGGC | Bspl286 I | G(A/G/T)GCHC |
| BspH I | TCATGA | BspM I | ACCTGC |
| BspM II | TCCGGA | BssH II | GCGCGC |
| Bst I | GGATCC | BstB I | TTCGAA |
| BstE II | GGTNACC | BstN I | CC(A/T)GG |
| BstU I | CGCG | BstX I | CCANNNNNNTGG |
| BstY I | (A/G)GATC(C/T) | BsuE I | CGCG |
| BsuF I | CCGG | BsuM I | CTCGAG |
| BsuQ I | CCGG | BsuR I | GGCC |
| Ccr I | CTCGAG | Cto I | GCGC |
| Cfr I | (C/T)GGCC(A/G) | Cfr6 I | CAGCTG |
| Cfr9 I | CCCGGG | Cfr10 I | (A/G)CCGG(C/T) |
| Cfrl3 I | GGNCC | Cla I | ATCGAT |
| Cpe I | TGATCA | Csp I | CGG(A/T)CCG |
| Csp45 I | TTCGAA | CviJ I | (A/G)GC(C/T) |
| CviP I | CC | Dde I | CTNAG |
| Dpn I | GmATC | Dpn II | GATC |
| Dra I | TTTAAA | Dra II | (A/G)GGNCC(C/T) |
| Eae I | (C/T)GGCC(A/G) | Eag I | CGGCCG |
| Ear I | GAAGAG | EclX I | CGGCCG |
| Eco47 I | GG(A/T)CC | Eco47 III | AGCGCT |
| EcoA | GAGNNNNNNNGTCA | EcoB | TGANNNNNNNNTGCT |
| EcoD XXI | TCANNNNNNNAATC | EcoE | GAGNNNNNNNATGC |
| EcoK | AACNNNNNNGTGC | EcoO109 I | (A/G)GGNCC(C/T) |
| EcoR I | GAATTC | EcoR II | CC(A/T)GG |
| EcoR V | GATATC | EcoR 124 | GAANNNNNN(A/G)TCG |
| EcoR 124/3 | GAANNNNNNN(A/G)TCG | Ehe I | GGCGCC |
| Esp I | GCTNAGC | Fnu4H I | GCNGC |
| FnuD II | CGCG | Fok I | CATCC |
| Fse I | GGCCGGCC | Fsp I | TGCGCA |
| Hae II | (A/G)GCGCY | Hae III | GGCC |
| Hap II | CCGG | Hga I | GACGC |
| HgiA I | G(A/G)GC(C/T)C | HgiC I | GG(C/T)(A/G)CC |
| HgiC II | GG(A/T)CC | HgiE I | GG(A/T)CC |
| HgiJ II | GG(C/T)(A/G)CC | Hha I | GCGC |
| Hha II | GANTC | Hinc II | GT(C/T)(A/G)AC |
| Hind II | GT(C/T)(A/G)AC | Hind III | AAGCTT |
| Hinf I | GANTC | HinP I | GCGC |
| Hpa I | GTTAAC | Hpa II | CCGG |
| Hph I | TCACC | Kpn I | GGTACC |
| Kpn2 I | TCCGGA | Ksp I | CCGCGG |
| Mae II | ACGT | Mam I | GATNNNNATC |
| Mbo I | GATC | Mbo II | GAAGA |
| Mfl I | (A/G)GATC(C/T) | Mlu I | ACGCGT |
| Mme II | GATC | Mnl I | CCTC |
| Mro I | TCCGGA | Mse I | TTAA |
| Msp I | CCGG | Mst II | CCTNAGG |
| Mun I | CAATTG | Mva I | CC(A/T)GG |
| Mvn I | CGCG | Nae I | GCCGGC |
| Nar I | GGCGCC | Nci I | CC(G/C)GG |
| Nco I | CCATGG | Nde I | CATATG |
| Nde II | GATC | Nhe I | GCTAGC |
| Nla III | CATG | Not I | GCGGCCGC |
| Nru I | TCGCGA | Nsi I | ATGCAT |
| Nsp I | (A/G)CATG(C/T) | NspB II | C(A/C)GC(G/T)G |
| PflM I | CCANNNNNTGG | Pfu I | CGTACG |
| PaeR7 I | CTCGAG | Pml I | CACGTG |
| PpuAI | CGTACG | PspA I | CCCGGG |
| Pst I | CTGCAG | Pvu I | CGATCG |
| Pvu II | CAGCTG | Rsa I | GTAC |
| Rsr I | GAATTC | Rsr II | CGG(A/T)CCG |
| Sac I | GAGCTC | Sac II | CCGCGG |
| Sal I | GTCGAC | Sau3A I | GATC |
| Sau96 I | GGNCC | Sca I | AGTACT |
| ScrF I | CCNGG | SfaN I | GATGC |
| Sfi I | GGCCNNNNNGGCC | Sfl I | CTGCAG |
| SgrA I | CRCCGG(C/T)G | Sin I | GGWCC |
| Sma I | CCCGGG | SnaB I | TACGTA |
| Sno I | GTGCAC | Spe I | ACTAGT |
| Sph I | GCATGC | Spl I | CGTACG |
| Spo I | TCGCGA | Srf I | GCCC/GGGC |
| Ssp I | AATATT | Sst I | GAGCTC |
| Stu I | AGGCCT | StySP I | AACNNNNNNGT(A/G)C |
| Taq I | TCGA | Taq II | GACCGA or, CACCCA |
| Tfi I | GA(A/T)TC | Tha I | CGCG |
| Xba I | TCTAGA | Xho I | CTCGAG |
| Xho II | (A/G)GATCPy | Xma I | CCCGGG |
| Xma III | CGGCCG | Xmn I | GAANNNNTTC |
| Xor II | CGATCG |
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